Non-Coding RNA Search

ruio19_i5.y1

Sequence:


               
               ATGCTTCCACCCTGGAGGCTATTTTCAGGTTCCTAAATGTACACTGATTTCAGCATTTTC
TCTGGCAACATGATGTATCTTTTCCTTGGCCCGATACACCCATTTCTACCTAAATGCCCT
CTTCTATCTTTTCATCTTATCAGTTAACTATTTAGATTCTGCTGATCTTTAGAGATGTTT
CACAGCCCCTAAAAAGGTAATTAATTTGACATTTCATCAATCTTGCTAATAAATGAACAC
CAGCCCACAAACTGTCCGTGGTCTCCGATATATCTGATATAGCTCATGTTCACTGGTGCC
ATAACTAATAAATTCTTAGAGTAGAAAGTGGCCTTTAATTATTTTATAGTTCTAATCTCA
AGCCAGTTTTAGTTTCTATTAGAGGGGCTTATTGGAGTGGTATTATAGTGATTGGATTCA
AAGAGCAATATTTTTTATTCAGGCTTCCGGACAAAAGTATGCACACATTTAAAAAATATT
TCCCATCTCTATGTAAAGCTATTTGAATCCAACTTTTCCCTTCGGTACGCACTGTCATCA
GCTTTTAACACATGGTAAGATTAAATTTAGGTTGACGGTTTCATGGGGAATATGAGAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGCTTCCACCCTGGAGGCTATTTTCAGGTTCCTAAATGTACACTGATTTCAGCATTTTC
TCTGGCAACATGATGTATCTTTTCCTTGGCCCGATACACCCATTTCTACCTAAATGCCCT
CTTCTATCTTTTCATCTTATCAGTTAACTATTTAGATTCTGCTGATCTTTAGAGATGTTT
CACAGCCCCTAAAAAGGTAATTAATTTGACATTTCATCAATCTTGCTAATAAATGAACAC
CAGCCCACAAACTGTCCGTGGTCTCCGATATATCTGATATAGCTCATGTTCACTGGTGCC
ATAACTAATAAATTCTTAGAGTAGAAAGTGGCCTTTAATTATTTTATAGTTCTAATCTCA
AGCCAGTTTTAGTTTCTATTAGAGGGGCTTATTGGAGTGGTATTATAGTGATTGGATTCA
AAGAGCAATATTTTTTATTCAGGCTTCCGGACAAAAGTATGCACACATTTAAAAAATATT
TCCCATCTCTATGTAAAGCTATTTGAATCCAACTTTTCCCTTCGGTACGCACTGTCATCA
GCTTTTAACACATGGTAAGATTAAATTTAGGTTGACGGTTTCATGGGGAATATGAGAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-393, gnl|bosTau2|chr13 (20148091-20147707)
               

               
               1-393, gnl|Hg17|chr10 (16599090-16599476)
               

               
               1-393, gnl|Mm7|chr2 (12945904-12946290)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-393, gnl|bosTau2|chr13 (20148091-20147707)
               

               
               1-393, gnl|Hg17|chr10 (16599090-16599476)
               

               
               1-393, gnl|Mm7|chr2 (12945904-12946290)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	1-393, gnl\|bosTau2\|chr13 (20148091-20147707)
	1-393, gnl\|Hg17\|chr10 (16599090-16599476)
	1-393, gnl\|Mm7\|chr2 (12945904-12946290)