Non-Coding RNA Search

ruio19_i6.y1

Sequence:


               
               GCTGTATATCTATATATTTTCATTCTTTCTAGAATTAGTGTTTTTTTTAATTAAATACTA
CACAGATTCCCAAATGCAATGTTTTATTACTGTTTTTTGCTAAATAGCCTTACGTTTGGA
TTTACATGTACTCTTTCACCCACGAGTTGTTTAAGAAAGGGTAAGAGAAAATGTATATTC
TCTATTTCTATTTTCTAGGTATGGAGTTGAATATGTATCAATCATACCAACCTTGTTAAA
TGTATTACTTGGGCATTCATTTTCAACATTTTTATGTCTTTACTTGAGTCTGGTGTATGT
GATTAAAAGTTGGGGGTAAGCTTTGTAAACCAATCTCAAAATATATACCTAAATGAGTTA
AGCCCATTTACTTTTATCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGTATATCTATATATTTTCATTCTTTCTAGAATTAGTGTTTTTTTTAATTAAATACTA
CACAGATTCCCAAATGCAATGTTTTATTACTGTTTTTTGCTAAATAGCCTTACGTTTGGA
TTTACATGTACTCTTTCACCCACGAGTTGTTTAAGAAAGGGTAAGAGAAAATGTATATTC
TCTATTTCTATTTTCTAGGTATGGAGTTGAATATGTATCAATCATACCAACCTTGTTAAA
TGTATTACTTGGGCATTCATTTTCAACATTTTTATGTCTTTACTTGAGTCTGGTGTATGT
GATTAAAAGTTGGGGGTAAGCTTTGTAAACCAATCTCAAAATATATACCTAAATGAGTTA
AGCCCATTTACTTTTATCG

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               1-259, gnl|bosTau2|chr2 (70614842-70614585)
               

               
               1-259, gnl|canFam2|chr25 (45603874-45604023)
               

               
               1-259, gnl|hg17|chr2 (231175493-231175665)
               

               
               1-259, gnl|loxAfr1|scaffold_101224 (6098-5969)
               

               
               1-259, gnl|oryCun1|scaffold_176355 (47647-47811)
               

               
               1-259, gnl|panTro1|chr13 (121826070-121826242)
               

               
               1-259, gnl|rheMac2|chr12 (94353281-94353453)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-259, gnl|bosTau2|chr2 (70614842-70614585)
               

               
               1-259, gnl|canFam2|chr25 (45603874-45604023)
               

               
               1-259, gnl|hg17|chr2 (231175493-231175665)
               

               
               1-259, gnl|loxAfr1|scaffold_101224 (6098-5969)
               

               
               1-259, gnl|oryCun1|scaffold_176355 (47647-47811)
               

               
               1-259, gnl|panTro1|chr13 (121826070-121826242)
               

               
               1-259, gnl|rheMac2|chr12 (94353281-94353453)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	1-259, gnl\|bosTau2\|chr2 (70614842-70614585)
	1-259, gnl\|canFam2\|chr25 (45603874-45604023)
	1-259, gnl\|hg17\|chr2 (231175493-231175665)
	1-259, gnl\|loxAfr1\|scaffold_101224 (6098-5969)
	1-259, gnl\|oryCun1\|scaffold_176355 (47647-47811)
	1-259, gnl\|panTro1\|chr13 (121826070-121826242)
	1-259, gnl\|rheMac2\|chr12 (94353281-94353453)