Non-Coding RNA Search

ruio21_g6.y1

Sequence:


               
               GTTAAAATCAGAAATAGGACAAATTCAGTTCTTTTAAAGATACCTACAAAAACTACAAAT
GTAATCTTTAGTTCTAACAGGACAGTTTCAGATAATGTGAAGAATTGAATCACAAGGTTA
ATGGGTGATATGAGGCTATATCAAATGTAAGAGCACAGGGAAATCTTGATTTTGGATTAT
GAATACTTCTGAAATTTAGAAAGTAGCAGAAGGGATAATTTTGGATTAAGTAGCAGGGAT
TTACAATTTGCTAAACCTGCTATTGGCATGTTTTAAAAAAGGTAGTATAATTTTTTTTTT
TTGCTCTATTTTTATTGTCTGCTTTGCCTTGTTCAATTCATGAACAGATAAGTGCTTCCT
CATGTTGTATATAATGATTGTTATTAGCTTCTGGACAAAGAAAACTAAATATTCCGTATC
ATTTAGACATATTGAAAAATGTAACATAAATTAATAAAAATGAATGCTTGATATTTTATC
AAATACTCTCAAAAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTAAAATCAGAAATAGGACAAATTCAGTTCTTTTAAAGATACCTACAAAAACTACAAAT
GTAATCTTTAGTTCTAACAGGACAGTTTCAGATAATGTGAAGAATTGAATCACAAGGTTA
ATGGGTGATATGAGGCTATATCAAATGTAAGAGCACAGGGAAATCTTGATTTTGGATTAT
GAATACTTCTGAAATTTAGAAAGTAGCAGAAGGGATAATTTTGGATTAAGTAGCAGGGAT
TTACAATTTGCTAAACCTGCTATTGGCATGTTTTAAAAAAGGTAGTATAATTTTTTTTTT
TTGCTCTATTTTTATTGTCTGCTTTGCCTTGTTCAATTCATGAACAGATAAGTGCTTCCT
CATGTTGTATATAATGATTGTTATTAGCTTCTGGACAAAGAAAACTAAATATTCCGTATC
ATTTAGACATATTGAAAAATGTAACATAAATTAATAAAAATGAATGCTTGATATTTTATC
AAATACTCTCAAAAACAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               2-498, gnl|bosTau2|chr2 (23306151-23305650)
               

               
               2-498, gnl|canFam2|chr36 (11920559-11921171)
               

               
               2-498, gnl|dasNov1|scaffold_2221 (89152-88592)
               

               
               2-498, gnl|echTel1|scaffold_318894 (255200-254634)
               

               
               2-498, gnl|hg17|chr2 (164282102-164282695)
               

               
               2-498, gnl|Hg17|chr2 (164282716-164282218)
               

               
               2-498, gnl|loxAfr1|scaffold_7954 (37161-36578)
               

               
               2-498, gnl|mm7|chr2 (63899462-63900002)
               

               
               2-498, gnl|Mm7|chr2 (63900023-63899576)
               

               
               2-498, gnl|monDom2|scaffold_2 (59063772-59064357)
               

               
               2-498, gnl|oryCun1|scaffold_198393 (196881-196333)
               

               
               2-498, gnl|panTro1|chr13 (53680752-53681345)
               

               
               2-498, gnl|rheMac2|chr12 (27223616-27224209)
               

               
               2-498, gnl|rn3|chr3 (45893684-45894261)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-498, gnl|bosTau2|chr2 (23306151-23305650)
               

               
               2-498, gnl|canFam2|chr36 (11920559-11921171)
               

               
               2-498, gnl|dasNov1|scaffold_2221 (89152-88592)
               

               
               2-498, gnl|echTel1|scaffold_318894 (255200-254634)
               

               
               2-498, gnl|hg17|chr2 (164282102-164282695)
               

               
               2-498, gnl|Hg17|chr2 (164282716-164282218)
               

               
               2-498, gnl|loxAfr1|scaffold_7954 (37161-36578)
               

               
               2-498, gnl|mm7|chr2 (63899462-63900002)
               

               
               2-498, gnl|Mm7|chr2 (63900023-63899576)
               

               
               2-498, gnl|monDom2|scaffold_2 (59063772-59064357)
               

               
               2-498, gnl|oryCun1|scaffold_198393 (196881-196333)
               

               
               2-498, gnl|panTro1|chr13 (53680752-53681345)
               

               
               2-498, gnl|rheMac2|chr12 (27223616-27224209)
               

               
               2-498, gnl|rn3|chr3 (45893684-45894261)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               kid (0.129735)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	2-498, gnl\|bosTau2\|chr2 (23306151-23305650)
	2-498, gnl\|canFam2\|chr36 (11920559-11921171)
	2-498, gnl\|dasNov1\|scaffold_2221 (89152-88592)
	2-498, gnl\|echTel1\|scaffold_318894 (255200-254634)
	2-498, gnl\|hg17\|chr2 (164282102-164282695)
	2-498, gnl\|Hg17\|chr2 (164282716-164282218)
	2-498, gnl\|loxAfr1\|scaffold_7954 (37161-36578)
	2-498, gnl\|mm7\|chr2 (63899462-63900002)
	2-498, gnl\|Mm7\|chr2 (63900023-63899576)
	2-498, gnl\|monDom2\|scaffold_2 (59063772-59064357)
	2-498, gnl\|oryCun1\|scaffold_198393 (196881-196333)
	2-498, gnl\|panTro1\|chr13 (53680752-53681345)
	2-498, gnl\|rheMac2\|chr12 (27223616-27224209)
	2-498, gnl\|rn3\|chr3 (45893684-45894261)