Non-Coding RNA Search

ruio24_o5.y1

Sequence:


               
               AAGTAATTCTTTTTAACGCAACTTATTTAAAATCCATATGTTTGGGCAATCATCTGAGCT
TTAATCAGATCTTACATAACTCTTCACAGTCATCTCAGTTTCATGTTTATTGCAAAAAAA
TTGTAGAATGTGAAGAATTCTATCTTCTGCTAAACTGTTTATTATACTTTCAGACATCAG
TTTTGTATTAATAAGGACCTTTTATTTGAGTAGTCATATCCAGCTTCATAAGAGAGAAGC
TTTCTACCTAAATGAGGGTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTAATTCTTTTTAACGCAACTTATTTAAAATCCATATGTTTGGGCAATCATCTGAGCT
TTAATCAGATCTTACATAACTCTTCACAGTCATCTCAGTTTCATGTTTATTGCAAAAAAA
TTGTAGAATGTGAAGAATTCTATCTTCTGCTAAACTGTTTATTATACTTTCAGACATCAG
TTTTGTATTAATAAGGACCTTTTATTTGAGTAGTCATATCCAGCTTCATAAGAGAGAAGC
TTTCTACCTAAATGAGGGTCCA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               2-262, gnl|bosTau2|chr10 (42992771-42992514)
               

               
               2-262, gnl|canFam2|chr30 (17463358-17463736)
               

               
               2-262, gnl|dasNov1|scaffold_511 (88980-89368)
               

               
               2-262, gnl|echTel1|scaffold_284143 (48350-48709)
               

               
               2-262, gnl|galGal2|chr10 (10667736-10668137)
               

               
               2-262, gnl|hg17|chr15 (46301550-46301940)
               

               
               2-262, gnl|Hg17|chr15 (46301772-46302046)
               

               
               2-262, gnl|loxAfr1|scaffold_3029 (74569-74962)
               

               
               2-262, gnl|mm7|chr2 (124903010-124903396)
               

               
               2-262, gnl|Mm7|chr2 (124903235-124903484)
               

               
               2-262, gnl|monDom2|scaffold_12 (20835265-20834874)
               

               
               2-262, gnl|panTro1|chr16 (46276802-46277192)
               

               
               2-262, gnl|rheMac2|chr7 (26550996-26551385)
               

               
               2-262, gnl|rn3|chr3 (112373524-112373903)
               

               
               2-262, gnl|xenTro1|scaffold_27 (2647463-2647827)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-262, gnl|bosTau2|chr10 (42992771-42992514)
               

               
               2-262, gnl|canFam2|chr30 (17463358-17463736)
               

               
               2-262, gnl|dasNov1|scaffold_511 (88980-89368)
               

               
               2-262, gnl|echTel1|scaffold_284143 (48350-48709)
               

               
               2-262, gnl|galGal2|chr10 (10667736-10668137)
               

               
               2-262, gnl|hg17|chr15 (46301550-46301940)
               

               
               2-262, gnl|Hg17|chr15 (46301772-46302046)
               

               
               2-262, gnl|loxAfr1|scaffold_3029 (74569-74962)
               

               
               2-262, gnl|mm7|chr2 (124903010-124903396)
               

               
               2-262, gnl|Mm7|chr2 (124903235-124903484)
               

               
               2-262, gnl|monDom2|scaffold_12 (20835265-20834874)
               

               
               2-262, gnl|panTro1|chr16 (46276802-46277192)
               

               
               2-262, gnl|rheMac2|chr7 (26550996-26551385)
               

               
               2-262, gnl|rn3|chr3 (112373524-112373903)
               

               
               2-262, gnl|xenTro1|scaffold_27 (2647463-2647827)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               kid (0.129735)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	2-262, gnl\|bosTau2\|chr10 (42992771-42992514)
	2-262, gnl\|canFam2\|chr30 (17463358-17463736)
	2-262, gnl\|dasNov1\|scaffold_511 (88980-89368)
	2-262, gnl\|echTel1\|scaffold_284143 (48350-48709)
	2-262, gnl\|galGal2\|chr10 (10667736-10668137)
	2-262, gnl\|hg17\|chr15 (46301550-46301940)
	2-262, gnl\|Hg17\|chr15 (46301772-46302046)
	2-262, gnl\|loxAfr1\|scaffold_3029 (74569-74962)
	2-262, gnl\|mm7\|chr2 (124903010-124903396)
	2-262, gnl\|Mm7\|chr2 (124903235-124903484)
	2-262, gnl\|monDom2\|scaffold_12 (20835265-20834874)
	2-262, gnl\|panTro1\|chr16 (46276802-46277192)
	2-262, gnl\|rheMac2\|chr7 (26550996-26551385)
	2-262, gnl\|rn3\|chr3 (112373524-112373903)
	2-262, gnl\|xenTro1\|scaffold_27 (2647463-2647827)