Non-Coding RNA Search

ruio26_b14.y1

Sequence:


               
               AAGGAAGCTCCAATTCACAGGAGGTGGAGCCATTAAAGAAAACAAAGGAAGAGAAAGCTT
TCAAGCCTTTGCCTGCCCAGGACAGAGCTGGATACCGGGAATTAGGACATTTTAATGGGA
ACTTTGGGACTGCGGTCTTCAAAATTTCTCGCTTACCTCCTtaaaagaaatttgagaaac
tatgtttcttcttgtacttataaggtcacatctaaaatgtttcatcttaagtttaaataa
tggcaaagtttgttatttctggcatattataggtattggcattttaaaataagattgtta
catcagtcttcgagtgtatccaagggaagctaaatatcataATGCATCTATCATCCATTT
AAAAAATACATGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGAAGCTCCAATTCACAGGAGGTGGAGCCATTAAAGAAAACAAAGGAAGAGAAAGCTT
TCAAGCCTTTGCCTGCCCAGGACAGAGCTGGATACCGGGAATTAGGACATTTTAATGGGA
ACTTTGGGACTGCGGTCTTCAAAATTTCTCGCTTACCTCCTtaaaagaaatttgagaaac
tatgtttcttcttgtacttataaggtcacatctaaaatgtttcatcttaagtttaaataa
tggcaaagtttgttatttctggcatattataggtattggcattttaaaataagattgtta
catcagtcttcgagtgtatccaagggaagctaaatatcataATGCATCTATCATCCATTT
AAAAAATACATGAA

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               3-112, gnl|bosTau2|chr24 (32961467-32961575)
               

               
               3-112, gnl|canFam2|chr1 (26967408-26967246)
               

               
               3-112, gnl|dasNov1|scaffold_42774 (5576-5429)
               

               
               3-112, gnl|hg17|chr18 (46802779-46802912)
               

               
               3-112, gnl|Hg17|chr18 (46802778-46802870)
               

               
               3-112, gnl|loxAfr1|scaffold_52107 (17029-16840)
               

               
               3-112, gnl|mm7|chr18 (74105103-74104921)
               

               
               3-112, gnl|oryCun1|scaffold_182097 (76295-76072)
               

               
               3-112, gnl|panTro1|chr17 (43399486-43399619)
               

               
               3-112, gnl|rheMac2|chr18 (44121666-44121819)
               

               
               3-112, gnl|rn3|chr18 (70556163-70556009)
               


               
               122-374, gnl|bosTau2|chr24 (32961614-32961849)
               

               
               122-374, gnl|Hg17|chr18 (46802904-46803382)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-112, gnl|bosTau2|chr24 (32961467-32961575)
               

               
               3-112, gnl|canFam2|chr1 (26967408-26967246)
               

               
               3-112, gnl|dasNov1|scaffold_42774 (5576-5429)
               

               
               3-112, gnl|hg17|chr18 (46802779-46802912)
               

               
               3-112, gnl|Hg17|chr18 (46802778-46802870)
               

               
               3-112, gnl|loxAfr1|scaffold_52107 (17029-16840)
               

               
               3-112, gnl|mm7|chr18 (74105103-74104921)
               

               
               3-112, gnl|oryCun1|scaffold_182097 (76295-76072)
               

               
               3-112, gnl|panTro1|chr17 (43399486-43399619)
               

               
               3-112, gnl|rheMac2|chr18 (44121666-44121819)
               

               
               3-112, gnl|rn3|chr18 (70556163-70556009)
               


               
               122-374, gnl|bosTau2|chr24 (32961614-32961849)
               

               
               122-374, gnl|Hg17|chr18 (46802904-46803382)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               kid (0.129735)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	3-112, gnl\|bosTau2\|chr24 (32961467-32961575)
	3-112, gnl\|canFam2\|chr1 (26967408-26967246)
	3-112, gnl\|dasNov1\|scaffold_42774 (5576-5429)
	3-112, gnl\|hg17\|chr18 (46802779-46802912)
	3-112, gnl\|Hg17\|chr18 (46802778-46802870)
	3-112, gnl\|loxAfr1\|scaffold_52107 (17029-16840)
	3-112, gnl\|mm7\|chr18 (74105103-74104921)
	3-112, gnl\|oryCun1\|scaffold_182097 (76295-76072)
	3-112, gnl\|panTro1\|chr17 (43399486-43399619)
	3-112, gnl\|rheMac2\|chr18 (44121666-44121819)
	3-112, gnl\|rn3\|chr18 (70556163-70556009)

	122-374, gnl\|bosTau2\|chr24 (32961614-32961849)
	122-374, gnl\|Hg17\|chr18 (46802904-46803382)