Non-Coding RNA Search

rute2103b_m22.y1

Sequence:


               
               GTGTGAAGATTTTACTTGTAAACTGTGTGTGGTTTTTGACAGTGTGAGCATGTAGCAGAT
ACAGCTCAGAAAACAGAAGTGGTTGGTTTTTCTTTTAAATCCCAAATTCCCATGTGAAAG
CTGAATTTGTGTCCTCGTGTGACTTTTTGAGCAAAAAGTTTACAACACTTGGATTCTAGA
ATCAGGCTTTCCAGCTGGTAGAATTTGTTGTGTAGATATAGGGTTATTCCACAGTATTTC
GACGCCAAACACAGTCGTACTTAGCAAACGTCCTGATCTCTTTGTATAACTTATTCACAA
TTATTCTATTCAAATGGCATAGCTATAGCTTCAAAAATTCTCTTACTCAAAATTATTCTA
TTCAAATGGCATAGCTATAGCTTCAAAAATTCTCTTCTACAAATCTATCCAAATGAGGGT
TAACGAGTGGCAAAAGCATTCAATTAATACTTTCATACAAGATCAAATTAATTCATATTT
GTGAAACCATCCATACAGATACTGTGGAATGACCCCCTAACAGTGTGGAAGAGACATATG
CTGCAGTTAACTGATGGTCTCAGTTAGGGTGCGAACGTGTGAGACACACCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTGAAGATTTTACTTGTAAACTGTGTGTGGTTTTTGACAGTGTGAGCATGTAGCAGAT
ACAGCTCAGAAAACAGAAGTGGTTGGTTTTTCTTTTAAATCCCAAATTCCCATGTGAAAG
CTGAATTTGTGTCCTCGTGTGACTTTTTGAGCAAAAAGTTTACAACACTTGGATTCTAGA
ATCAGGCTTTCCAGCTGGTAGAATTTGTTGTGTAGATATAGGGTTATTCCACAGTATTTC
GACGCCAAACACAGTCGTACTTAGCAAACGTCCTGATCTCTTTGTATAACTTATTCACAA
TTATTCTATTCAAATGGCATAGCTATAGCTTCAAAAATTCTCTTACTCAAAATTATTCTA
TTCAAATGGCATAGCTATAGCTTCAAAAATTCTCTTCTACAAATCTATCCAAATGAGGGT
TAACGAGTGGCAAAAGCATTCAATTAATACTTTCATACAAGATCAAATTAATTCATATTT
GTGAAACCATCCATACAGATACTGTGGAATGACCCCCTAACAGTGTGGAAGAGACATATG
CTGCAGTTAACTGATGGTCTCAGTTAGGGTGCGAACGTGTGAGACACACCTT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-356, gnl|bosTau2|chr17 (9674966-9674621)
               

               
               1-356, gnl|Hg17|chrX (131234766-131234386)
               

               
               1-356, gnl|Mm7|chrX (46208902-46208542)
               


               
               460-592, gnl|bosTau2|chr17 (9674589-9674457)
               

               
               460-592, gnl|Hg17|chrX (131234354-131234221)
               

               
               460-592, gnl|Mm7|chrX (46208515-46208382)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-356, gnl|bosTau2|chr17 (9674966-9674621)
               

               
               1-356, gnl|Hg17|chrX (131234766-131234386)
               

               
               1-356, gnl|Mm7|chrX (46208902-46208542)
               


               
               460-592, gnl|bosTau2|chr17 (9674589-9674457)
               

               
               460-592, gnl|Hg17|chrX (131234354-131234221)
               

               
               460-592, gnl|Mm7|chrX (46208515-46208382)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	1-356, gnl\|bosTau2\|chr17 (9674966-9674621)
	1-356, gnl\|Hg17\|chrX (131234766-131234386)
	1-356, gnl\|Mm7\|chrX (46208902-46208542)

	460-592, gnl\|bosTau2\|chr17 (9674589-9674457)
	460-592, gnl\|Hg17\|chrX (131234354-131234221)
	460-592, gnl\|Mm7\|chrX (46208515-46208382)