Non-Coding RNA Search

rute2114b_f5.y1

Sequence:


               
               AAAGGGGATTCTTGCCAGGAGTGTGGCTAATGTCGATGAACTCAGGCAGGAACTTTTTCA
CACACAAAGAGAATTCCTGAAGGAGAGGACAAGATGCCGAGCGCTGGAGGAGGAGCTGGA
GAACCCCATGAACATACACAGATGGAGGAAGCTTGAGGCCAGTGACCCCAGTACCTTTGA
GCTGATCCAGAAAATTCATACCCTGCAGAAGCGTCTCATCAGCAAGACAGAAGAGGTGGT
GGAAAAAGAGCTGCTTCTCCAGGAAAAGGAGAAACTGTATGTGGAACTAAAGCACATCCT
GGCACGTCAGCCTGGGCCTGAGGCTGCAGAGCAGCTACAGATCTACCGCCACACACTGCG
GGAGAAGACCAAGCAGCTAAAAGTTTTGTCCTCAGAACTGAATATGTATGAATCACAGAG
CCAAGAATATAAGTACGAGATTGAGAAACTTACCAATGAACTGCTGAATTTAAAGAAGAA
ATACCTTGCCCAGAAACGTAAAGAATACATTCAGAAGAACAAGGACAGAATAAGCATGGA
TGATGCCTTCTCCATGGCCAAACCCACTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGGGATTCTTGCCAGGAGTGTGGCTAATGTCGATGAACTCAGGCAGGAACTTTTTCA
CACACAAAGAGAATTCCTGAAGGAGAGGACAAGATGCCGAGCGCTGGAGGAGGAGCTGGA
GAACCCCATGAACATACACAGATGGAGGAAGCTTGAGGCCAGTGACCCCAGTACCTTTGA
GCTGATCCAGAAAATTCATACCCTGCAGAAGCGTCTCATCAGCAAGACAGAAGAGGTGGT
GGAAAAAGAGCTGCTTCTCCAGGAAAAGGAGAAACTGTATGTGGAACTAAAGCACATCCT
GGCACGTCAGCCTGGGCCTGAGGCTGCAGAGCAGCTACAGATCTACCGCCACACACTGCG
GGAGAAGACCAAGCAGCTAAAAGTTTTGTCCTCAGAACTGAATATGTATGAATCACAGAG
CCAAGAATATAAGTACGAGATTGAGAAACTTACCAATGAACTGCTGAATTTAAAGAAGAA
ATACCTTGCCCAGAAACGTAAAGAATACATTCAGAAGAACAAGGACAGAATAAGCATGGA
TGATGCCTTCTCCATGGCCAAACCCACTGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               383-517, gnl|bosTau2|chr26 (16900593-16900459)
               

               
               383-517, gnl|Hg17|chr10 (106199819-106199953)
               

               
               383-517, gnl|Mm7|chr19 (47929518-47929652)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               383-517, gnl|bosTau2|chr26 (16900593-16900459)
               

               
               383-517, gnl|Hg17|chr10 (106199819-106199953)
               

               
               383-517, gnl|Mm7|chr19 (47929518-47929652)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	383-517, gnl\|bosTau2\|chr26 (16900593-16900459)
	383-517, gnl\|Hg17\|chr10 (106199819-106199953)
	383-517, gnl\|Mm7\|chr19 (47929518-47929652)