Non-Coding RNA Search

rute2115b_b5.y1

Sequence:


               
               TTAAAACAGTCTCAAGTGAGGACGTGGTTGGCCACATTGAGTTGGAGGAGAAAGACCATG
AAATGTAGACATAATTATGGAAAATTATCTCTTAGAATGTTTTCAGAAATGGAGATATCT
TTGATCAGAAGATTTCCCAAGAGGGGTCCGCGTGTGGTACTGCTTATTTGCTCAGAATGT
CTCTCTCAAATTTCAGATGCTACCCCTTCATTATAATACTTTAGGATTTGGATAGTTATG
TTCACCTTATCTAGCACTGTTCATGATGTAAGTCTTTGAAAATATTCCCTCTCATGCTTT
AT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAAACAGTCTCAAGTGAGGACGTGGTTGGCCACATTGAGTTGGAGGAGAAAGACCATG
AAATGTAGACATAATTATGGAAAATTATCTCTTAGAATGTTTTCAGAAATGGAGATATCT
TTGATCAGAAGATTTCCCAAGAGGGGTCCGCGTGTGGTACTGCTTATTTGCTCAGAATGT
CTCTCTCAAATTTCAGATGCTACCCCTTCATTATAATACTTTAGGATTTGGATAGTTATG
TTCACCTTATCTAGCACTGTTCATGATGTAAGTCTTTGAAAATATTCCCTCTCATGCTTT
AT

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               131-302, gnl|bosTau2|chr2 (56144675-56144503)
               

               
               131-302, gnl|canFam2|chr37 (17987481-17987647)
               

               
               131-302, gnl|echTel1|scaffold_162536 (1187-1335)
               

               
               131-302, gnl|hg17|chr2 (207123377-207123559)
               

               
               131-302, gnl|Hg17|chr2 (207123405-207123601)
               

               
               131-302, gnl|loxAfr1|scaffold_2278 (72965-73135)
               

               
               131-302, gnl|oryCun1|scaffold_212373 (107272-107105)
               

               
               131-302, gnl|panTro1|chr13 (97155382-97155564)
               

               
               131-302, gnl|rheMac2|chr12 (70327804-70327986)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               131-302, gnl|bosTau2|chr2 (56144675-56144503)
               

               
               131-302, gnl|canFam2|chr37 (17987481-17987647)
               

               
               131-302, gnl|echTel1|scaffold_162536 (1187-1335)
               

               
               131-302, gnl|hg17|chr2 (207123377-207123559)
               

               
               131-302, gnl|Hg17|chr2 (207123405-207123601)
               

               
               131-302, gnl|loxAfr1|scaffold_2278 (72965-73135)
               

               
               131-302, gnl|oryCun1|scaffold_212373 (107272-107105)
               

               
               131-302, gnl|panTro1|chr13 (97155382-97155564)
               

               
               131-302, gnl|rheMac2|chr12 (70327804-70327986)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	131-302, gnl\|bosTau2\|chr2 (56144675-56144503)
	131-302, gnl\|canFam2\|chr37 (17987481-17987647)
	131-302, gnl\|echTel1\|scaffold_162536 (1187-1335)
	131-302, gnl\|hg17\|chr2 (207123377-207123559)
	131-302, gnl\|Hg17\|chr2 (207123405-207123601)
	131-302, gnl\|loxAfr1\|scaffold_2278 (72965-73135)
	131-302, gnl\|oryCun1\|scaffold_212373 (107272-107105)
	131-302, gnl\|panTro1\|chr13 (97155382-97155564)
	131-302, gnl\|rheMac2\|chr12 (70327804-70327986)