rute2125b_i2.y1
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
AAACTGTAAATGTATCTTATGTGCCATGGCCTGAGAAGCCTTTTTTCTTTTTTCCTAAAA GTTATTTTCACTTTCTGAAAAGAGTAGAGGGTTTAGCTCAAGATAACAATGGTTCTGATA AAATTGGATTGGTAACTCTACCTCAGAAGGTTAATAAGAAAAAAAA |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
AAACTGTAAATGTATCTTATGTGCCATGGCCTGAGAAGCCTTTTTTCTTTTTTCCTAAAA GTTATTTTCACTTTCTGAAAAGAGTAGAGGGTTTAGCTCAAGATAACAATGGTTCTGATA AAATTGGATTGGTAACTCTACCTCAGAAGGTTAATAAGAAAAAAAA |
Predicted RNA structure(s): 2 entry(ies) | More info |
Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
12-110, - strand, RNAz p=0.657216 | |
14-112, - strand, RNAz p=0.614892 |
Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
12-110, - strand, RNAz p=0.657216 | |
14-112, - strand, RNAz p=0.614892 |
Aligned organism(s): 23 entry(ies) | More info |
Aligned organism(s): 23 entry(ies) | Help | Less info |
1-166, gnl|bosTau2|chr1 (57194783-57194948) | |
1-166, gnl|canFam2|chr34 (15687824-15688031) | |
1-166, gnl|canFam2|chr34 (15687824-15688031) | |
1-166, gnl|dasNov1|scaffold_14336 (4537-4771) | |
1-166, gnl|dasNov1|scaffold_14336 (4537-4771) | |
1-166, gnl|echTel1|scaffold_229787 (13590-13822) | |
1-166, gnl|echTel1|scaffold_229787 (13590-13822) | |
1-166, gnl|hg17|chr22 (15431677-15431896) | |
1-166, gnl|hg17|chr3 (180438711-180438931) | |
1-166, gnl|Hg17|chr3 (180438830-180438993) | |
1-166, gnl|loxAfr1|scaffold_6693 (60715-60494) | |
1-166, gnl|loxAfr1|scaffold_6693 (60715-60494) | |
1-166, gnl|mm7|chr3 (32275463-32275667) | |
1-166, gnl|mm7|chr3 (32275463-32275667) | |
1-166, gnl|Mm7|chr3 (32275566-32275718) | |
1-166, gnl|oryCun1|scaffold_150362 (10633-10412) | |
1-166, gnl|oryCun1|scaffold_150362 (10633-10412) | |
1-166, gnl|panTro1|chr2 (184193224-184193444) | |
1-166, gnl|panTro1|chr2 (184193224-184193444) | |
1-166, gnl|rheMac2|chr2 (107573402-107573181) | |
1-166, gnl|rheMac2|chr2 (107573402-107573181) | |
1-166, gnl|rn3|chr2 (118617994-118618209) | |
1-166, gnl|rn3|chr2 (118617994-118618209) |
Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
1-166, gnl|bosTau2|chr1 (57194783-57194948) | |
1-166, gnl|canFam2|chr34 (15687824-15688031) | |
1-166, gnl|canFam2|chr34 (15687824-15688031) | |
1-166, gnl|dasNov1|scaffold_14336 (4537-4771) | |
1-166, gnl|dasNov1|scaffold_14336 (4537-4771) | |
1-166, gnl|echTel1|scaffold_229787 (13590-13822) | |
1-166, gnl|echTel1|scaffold_229787 (13590-13822) | |
1-166, gnl|hg17|chr22 (15431677-15431896) | |
1-166, gnl|hg17|chr3 (180438711-180438931) | |
1-166, gnl|Hg17|chr3 (180438830-180438993) | |
1-166, gnl|loxAfr1|scaffold_6693 (60715-60494) | |
1-166, gnl|loxAfr1|scaffold_6693 (60715-60494) | |
1-166, gnl|mm7|chr3 (32275463-32275667) | |
1-166, gnl|mm7|chr3 (32275463-32275667) | |
1-166, gnl|Mm7|chr3 (32275566-32275718) | |
1-166, gnl|oryCun1|scaffold_150362 (10633-10412) | |
1-166, gnl|oryCun1|scaffold_150362 (10633-10412) | |
1-166, gnl|panTro1|chr2 (184193224-184193444) | |
1-166, gnl|panTro1|chr2 (184193224-184193444) | |
1-166, gnl|rheMac2|chr2 (107573402-107573181) | |
1-166, gnl|rheMac2|chr2 (107573402-107573181) | |
1-166, gnl|rn3|chr2 (118617994-118618209) | |
1-166, gnl|rn3|chr2 (118617994-118618209) |
Expressed library(ies): 1 entry(ies) | More info |
Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
ute (0.132784) |