Non-Coding RNA Search

rute2129b_a5.y1

Sequence:


               
               TTAATAAATGACATCATTCAATAATTAGTACATAATCCTCCTATAATTATTATAATTCCC
AGTACCTACCTTATGTGGATTACATTTGCAACACCCAAGTAAAATTTCTTCATTAATTGA
GAGGAAAAAAGTGGTTTAACGCCATTTAATTCTATAATAATTAGGGTAGATTAGTTTTAC
AATTACATCATCTTTGTAGCTATTCAATTTCTCCCAACTCATGTTTGAGACACTGGTTTT
GAAGAAGAAAAGAACACTGAACATAGAAGGCACTCAGGCAAAGGGTAATAATACAACCAA
TGTTAATGTAACTGACTTATGCTGAATGTCTACTAATAAAGGACAGCACTTTGTCTACAA
AAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAATAAATGACATCATTCAATAATTAGTACATAATCCTCCTATAATTATTATAATTCCC
AGTACCTACCTTATGTGGATTACATTTGCAACACCCAAGTAAAATTTCTTCATTAATTGA
GAGGAAAAAAGTGGTTTAACGCCATTTAATTCTATAATAATTAGGGTAGATTAGTTTTAC
AATTACATCATCTTTGTAGCTATTCAATTTCTCCCAACTCATGTTTGAGACACTGGTTTT
GAAGAAGAAAAGAACACTGAACATAGAAGGCACTCAGGCAAAGGGTAATAATACAACCAA
TGTTAATGTAACTGACTTATGCTGAATGTCTACTAATAAAGGACAGCACTTTGTCTACAA
AAAAAAAAAAAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               1-359, gnl|bosTau2|chrX (18875396-18875756)
               

               
               1-359, gnl|canFam2|chrX (86573208-86573489)
               

               
               1-359, gnl|dasNov1|scaffold_5260 (108837-109124)
               

               
               1-359, gnl|echTel1|scaffold_312644 (903-614)
               

               
               1-359, gnl|hg17|chrX (109353576-109353848)
               

               
               1-359, gnl|Hg17|chrX (109353617-109353959)
               

               
               1-359, gnl|mm7|chrX (137618029-137618302)
               

               
               1-359, gnl|Mm7|chrX (137618070-137618411)
               

               
               1-359, gnl|oryCun1|scaffold_182372 (29407-29652)
               

               
               1-359, gnl|panTro1|chrX_random (3831419-3831691)
               

               
               1-359, gnl|rheMac2|chrX (109032627-109032893)
               

               
               1-359, gnl|rn3|chrX (35655219-35654952)

Aligned organism(s): 12 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-359, gnl|bosTau2|chrX (18875396-18875756)
               

               
               1-359, gnl|canFam2|chrX (86573208-86573489)
               

               
               1-359, gnl|dasNov1|scaffold_5260 (108837-109124)
               

               
               1-359, gnl|echTel1|scaffold_312644 (903-614)
               

               
               1-359, gnl|hg17|chrX (109353576-109353848)
               

               
               1-359, gnl|Hg17|chrX (109353617-109353959)
               

               
               1-359, gnl|mm7|chrX (137618029-137618302)
               

               
               1-359, gnl|Mm7|chrX (137618070-137618411)
               

               
               1-359, gnl|oryCun1|scaffold_182372 (29407-29652)
               

               
               1-359, gnl|panTro1|chrX_random (3831419-3831691)
               

               
               1-359, gnl|rheMac2|chrX (109032627-109032893)
               

               
               1-359, gnl|rn3|chrX (35655219-35654952)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ute (0.132784)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)

	1-359, gnl\|bosTau2\|chrX (18875396-18875756)
	1-359, gnl\|canFam2\|chrX (86573208-86573489)
	1-359, gnl\|dasNov1\|scaffold_5260 (108837-109124)
	1-359, gnl\|echTel1\|scaffold_312644 (903-614)
	1-359, gnl\|hg17\|chrX (109353576-109353848)
	1-359, gnl\|Hg17\|chrX (109353617-109353959)
	1-359, gnl\|mm7\|chrX (137618029-137618302)
	1-359, gnl\|Mm7\|chrX (137618070-137618411)
	1-359, gnl\|oryCun1\|scaffold_182372 (29407-29652)
	1-359, gnl\|panTro1\|chrX_random (3831419-3831691)
	1-359, gnl\|rheMac2\|chrX (109032627-109032893)
	1-359, gnl\|rn3\|chrX (35655219-35654952)