Non-Coding RNA Search

rvin026_c16.y1

Sequence:


               
               GGCTTCCTCACCTGGAGCACTTATTCCATGCACCTCACAGGCCTGTTGTTGGGAGGGTCA
GGGAGATTTTTGATGTGAAAGCACTTTGTAAACTGCATACTATGCACAAATGCTCTAGAA
GGTATGATTATGCAGTTGGAAATCGCCAACCTGGAGACATCAGGCCTGCCAGCAGCCTTC
CTTGCTGACTTAGAAATAAATGAATGAGATGAATTTTATACTTTGTCTCTTAGTAAATCA
AATGAATACAGCAACAGTTGTGCTAAAATCCATTTTGGGATATAGAAGAAAGCTTTAAAG
ATTAGAAGGTGATTggagttccctggtggctcagtagtttatggatctggtgttaccact
gctatggctcaggttgctgctgtggcatgggtttgatccctggccctgggaacttTGGTG
TGCCAAGGGCAAGGTCGGTCGAAATAATTAGAAGGTGATTATTTTCAATATCTTGTAATA
ATAATGAAAAAGAACCTAAAATGTGTATAACTGAATCACTTTGCTGTACTCCTGAAACTA
ATACAGTACTGTGAATTAACTACACTTCAGTTAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTTCCTCACCTGGAGCACTTATTCCATGCACCTCACAGGCCTGTTGTTGGGAGGGTCA
GGGAGATTTTTGATGTGAAAGCACTTTGTAAACTGCATACTATGCACAAATGCTCTAGAA
GGTATGATTATGCAGTTGGAAATCGCCAACCTGGAGACATCAGGCCTGCCAGCAGCCTTC
CTTGCTGACTTAGAAATAAATGAATGAGATGAATTTTATACTTTGTCTCTTAGTAAATCA
AATGAATACAGCAACAGTTGTGCTAAAATCCATTTTGGGATATAGAAGAAAGCTTTAAAG
ATTAGAAGGTGATTggagttccctggtggctcagtagtttatggatctggtgttaccact
gctatggctcaggttgctgctgtggcatgggtttgatccctggccctgggaacttTGGTG
TGCCAAGGGCAAGGTCGGTCGAAATAATTAGAAGGTGATTATTTTCAATATCTTGTAATA
ATAATGAAAAAGAACCTAAAATGTGTATAACTGAATCACTTTGCTGTACTCCTGAAACTA
ATACAGTACTGTGAATTAACTACACTTCAGTTAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-314, gnl|bosTau2|chr23 (36980894-36980589)
               

               
               2-314, gnl|Hg17|chr6 (15364224-15364522)
               


               
               457-579, gnl|bosTau2|chr5 (16025379-16025253)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-314, gnl|bosTau2|chr23 (36980894-36980589)
               

               
               2-314, gnl|Hg17|chr6 (15364224-15364522)
               


               
               457-579, gnl|bosTau2|chr5 (16025379-16025253)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               vin (0.332557)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)

	2-314, gnl\|bosTau2\|chr23 (36980894-36980589)
	2-314, gnl\|Hg17\|chr6 (15364224-15364522)

	457-579, gnl\|bosTau2\|chr5 (16025379-16025253)