Non-Coding RNA Search

Ss1.1-Mixc-0028p05.3

Sequence:


               
               TATAAATATCTCAGGTATGGCAAAAGCTTTGGTCCAAATGCCCACCTCATGCACCAGATA
GCCCATCAAGTAGAAAATCCATATAAATGTGATGACTGTGGAAAAAGCTTCAGTCGGAGT
GCACGCCTCATTAGACACCGGAGAATCCACACTGGAGAGAAACCTTACAAGTGTCTTGAC
TGTGGGAAAAGTTTCCGTGACAGTTCAAATTTCATCACCCATAGGAGAATCCACACAGGA
GAGAAACCGTATCAGTGTGGTGAATGTGGAAAACGCTTCAATCAGAGCTCAAGTCTTATC
ATTCACCAGAGAACCCACACAGGAGAAAAGCCCTATCAGTGTGAAGAGTGTGGGAAGAGC
TTCAATAACAGTTCTCATTTTAGTGCACATCGGAGGATACACACAGGAGAGAGACCCCAC
GTGTGTCCTGACTGCGGAAAGAGTTTCAGTAAGAGTTCTGACTTGCGTGCACATCACAGA
ACCCACTGGAGAGAAACCCTATGGGTGTCATGACTGTGGCAAGTACTTCAGTAAAAGCTC
TGCTCTCAACAAGCACCGAGAGATCCATGCACGAGAAAAGCTTCTGTCACAGGTGGCACC
TAAGTAAGCCCCTGAGGATCAGTGAAGAAAACAGCTTCATTACATGTGTTGAAATTGTTT
GGAAAAGTCTTCCAATAGTGAGAGCCATCTCCTAACCTGTGCCTGACTAGTTTAGGAAAT
ACTCTAGAATTTATCCCACTGTTTGTTCCTGTGTTTCTCCTGGATCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATAAATATCTCAGGTATGGCAAAAGCTTTGGTCCAAATGCCCACCTCATGCACCAGATA
GCCCATCAAGTAGAAAATCCATATAAATGTGATGACTGTGGAAAAAGCTTCAGTCGGAGT
GCACGCCTCATTAGACACCGGAGAATCCACACTGGAGAGAAACCTTACAAGTGTCTTGAC
TGTGGGAAAAGTTTCCGTGACAGTTCAAATTTCATCACCCATAGGAGAATCCACACAGGA
GAGAAACCGTATCAGTGTGGTGAATGTGGAAAACGCTTCAATCAGAGCTCAAGTCTTATC
ATTCACCAGAGAACCCACACAGGAGAAAAGCCCTATCAGTGTGAAGAGTGTGGGAAGAGC
TTCAATAACAGTTCTCATTTTAGTGCACATCGGAGGATACACACAGGAGAGAGACCCCAC
GTGTGTCCTGACTGCGGAAAGAGTTTCAGTAAGAGTTCTGACTTGCGTGCACATCACAGA
ACCCACTGGAGAGAAACCCTATGGGTGTCATGACTGTGGCAAGTACTTCAGTAAAAGCTC
TGCTCTCAACAAGCACCGAGAGATCCATGCACGAGAAAAGCTTCTGTCACAGGTGGCACC
TAAGTAAGCCCCTGAGGATCAGTGAAGAAAACAGCTTCATTACATGTGTTGAAATTGTTT
GGAAAAGTCTTCCAATAGTGAGAGCCATCTCCTAACCTGTGCCTGACTAGTTTAGGAAAT
ACTCTAGAATTTATCCCACTGTTTGTTCCTGTGTTTCTCCTGGATCTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               40-579, gnl|bosTau2|chr10 (8996627-8996086)
               

               
               40-579, gnl|Hg17|chr19 (42818432-42817807)
               

               
               40-579, gnl|Mm7|chr2 (127310058-127309601)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-579, gnl|bosTau2|chr10 (8996627-8996086)
               

               
               40-579, gnl|Hg17|chr19 (42818432-42817807)
               

               
               40-579, gnl|Mm7|chr2 (127310058-127309601)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	40-579, gnl\|bosTau2\|chr10 (8996627-8996086)
	40-579, gnl\|Hg17\|chr19 (42818432-42817807)
	40-579, gnl\|Mm7\|chr2 (127310058-127309601)