Ss1.1-Pig3-SRG8011P19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGCGGGGTGGGTGCTGCTTGCTGCAGGCTCAGGGGAGTCGCCATGCCTACAACACAGC AGTCACCTCAGGATGAGCAAGAAAAGCTCTTGGATGAAGCCATACAGGCTGTGAAGGTCC AGTCATTCCAGATGAAGAGATGCCTGGACAAAAACAAGCTTATGGATGCTCTGAAACATG CTTCTAATATGCTTGGTGAACTCCGGACTTCTATGTTATCACCAAAGAGCTACTATGAAC TTTATATGGCTATTTCTGATGAACTGCACTACTTGGAAGTCTACCTGACAGATGAGTTTG CTAAAGGAAGAAAGGTGGCAGATCTCTATGAACTCGTGCAGTATGCTGGAAACATTATTC CAAGGCTTTACCTGCTAATCACAGTTGGAGTTGTATATGTCAAGTCATTTCCTCAGTCCA GGAAAGATATTTTGAAAGATTTGGTAGAAATGTGCCGTGGTGTACAGCATCCTTTGAGAG GTCTCTTTCTTCGGAATTATCTTCTTCAGTGTACCAGAAACATCTTACCTGATGAAGGAG AGCCCACAGATGAAGAGACAACTGGTGACATCAGTGATTCCATGGATTTTGTACTACTCA ACTTTGCAGAAATGAACAAGCTCTGGGTTCGAATGCAGCATCAGGGACATAGCCGAGATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGCGGGGTGGGTGCTGCTTGCTGCAGGCTCAGGGGAGTCGCCATGCCTACAACACAGC AGTCACCTCAGGATGAGCAAGAAAAGCTCTTGGATGAAGCCATACAGGCTGTGAAGGTCC AGTCATTCCAGATGAAGAGATGCCTGGACAAAAACAAGCTTATGGATGCTCTGAAACATG CTTCTAATATGCTTGGTGAACTCCGGACTTCTATGTTATCACCAAAGAGCTACTATGAAC TTTATATGGCTATTTCTGATGAACTGCACTACTTGGAAGTCTACCTGACAGATGAGTTTG CTAAAGGAAGAAAGGTGGCAGATCTCTATGAACTCGTGCAGTATGCTGGAAACATTATTC CAAGGCTTTACCTGCTAATCACAGTTGGAGTTGTATATGTCAAGTCATTTCCTCAGTCCA GGAAAGATATTTTGAAAGATTTGGTAGAAATGTGCCGTGGTGTACAGCATCCTTTGAGAG GTCTCTTTCTTCGGAATTATCTTCTTCAGTGTACCAGAAACATCTTACCTGATGAAGGAG AGCCCACAGATGAAGAGACAACTGGTGACATCAGTGATTCCATGGATTTTGTACTACTCA ACTTTGCAGAAATGAACAAGCTCTGGGTTCGAATGCAGCATCAGGGACATAGCCGAGATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 146-247, gnl|bosTau2|chr18 (16201317-16201418) | |
| 146-247, gnl|canFam2|chr15 (11446249-11446355) | |
| 146-247, gnl|danRer3|chr7 (35641868-35641974) | |
| 146-247, gnl|echTel1|scaffold_315366 (81254-81360) | |
| 146-247, gnl|fr1|chrUn (283509558-283509664) | |
| 146-247, gnl|galGal2|chr11 (8030568-8030674) | |
| 146-247, gnl|hg17|chr16 (34183807-34183913) | |
| 146-247, gnl|Hg17|chr16 (45273589-45273488) | |
| 146-247, gnl|mm7|chr8 (83880515-83880409) | |
| 146-247, gnl|Mm7|chr8 (83880514-83880413) | |
| 146-247, gnl|monDom2|scaffold_35 (10672185-10672079) | |
| 146-247, gnl|oryCun1|scaffold_175112 (5890-5793) | |
| 146-247, gnl|panTro1|chrUn_random (9040780-9040674) | |
| 146-247, gnl|rheMac2|chr20 (44492769-44492875) | |
| 146-247, gnl|rn3|chr19 (23138564-23138670) | |
| 146-247, gnl|tetNig1|chrUn_random (32517544-32517650) | |
| 146-247, gnl|xenTro1|scaffold_555 (135377-135271) | |
| 368-555, gnl|bosTau2|chr18 (16202717-16202904) | |
| 368-555, gnl|canFam2|chr15 (11447799-11447942) | |
| 368-555, gnl|danRer3|chr7 (35655456-35655590) | |
| 368-555, gnl|dasNov1|scaffold_16102 (34862-35005) | |
| 368-555, gnl|echTel1|scaffold_315366 (82339-82481) | |
| 368-555, gnl|fr1|chrUn (283510003-283510145) | |
| 368-555, gnl|galGal2|chr11 (8032995-8033140) | |
| 368-555, gnl|hg17|chr16 (34185110-34185252) | |
| 368-555, gnl|Hg17|chr16 (45272266-45272079) | |
| 368-555, gnl|loxAfr1|scaffold_7310 (38415-38273) | |
| 368-555, gnl|mm7|chr8 (83877258-83877117) | |
| 368-555, gnl|Mm7|chr8 (83877234-83877047) | |
| 368-555, gnl|monDom2|scaffold_35 (10669378-10669237) | |
| 368-555, gnl|oryCun1|scaffold_197565 (1355-1499) | |
| 368-555, gnl|panTro1|chrUn_random (9039468-9039326) | |
| 368-555, gnl|rheMac2|chr20 (44494069-44494211) | |
| 368-555, gnl|rn3|chr19 (23142064-23142206) | |
| 368-555, gnl|tetNig1|chrUn_random (32517979-32518113) | |
| 368-555, gnl|xenTro1|scaffold_555 (132660-132517) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 146-247, gnl|bosTau2|chr18 (16201317-16201418) | |
| 146-247, gnl|canFam2|chr15 (11446249-11446355) | |
| 146-247, gnl|danRer3|chr7 (35641868-35641974) | |
| 146-247, gnl|echTel1|scaffold_315366 (81254-81360) | |
| 146-247, gnl|fr1|chrUn (283509558-283509664) | |
| 146-247, gnl|galGal2|chr11 (8030568-8030674) | |
| 146-247, gnl|hg17|chr16 (34183807-34183913) | |
| 146-247, gnl|Hg17|chr16 (45273589-45273488) | |
| 146-247, gnl|mm7|chr8 (83880515-83880409) | |
| 146-247, gnl|Mm7|chr8 (83880514-83880413) | |
| 146-247, gnl|monDom2|scaffold_35 (10672185-10672079) | |
| 146-247, gnl|oryCun1|scaffold_175112 (5890-5793) | |
| 146-247, gnl|panTro1|chrUn_random (9040780-9040674) | |
| 146-247, gnl|rheMac2|chr20 (44492769-44492875) | |
| 146-247, gnl|rn3|chr19 (23138564-23138670) | |
| 146-247, gnl|tetNig1|chrUn_random (32517544-32517650) | |
| 146-247, gnl|xenTro1|scaffold_555 (135377-135271) | |
| 368-555, gnl|bosTau2|chr18 (16202717-16202904) | |
| 368-555, gnl|canFam2|chr15 (11447799-11447942) | |
| 368-555, gnl|danRer3|chr7 (35655456-35655590) | |
| 368-555, gnl|dasNov1|scaffold_16102 (34862-35005) | |
| 368-555, gnl|echTel1|scaffold_315366 (82339-82481) | |
| 368-555, gnl|fr1|chrUn (283510003-283510145) | |
| 368-555, gnl|galGal2|chr11 (8032995-8033140) | |
| 368-555, gnl|hg17|chr16 (34185110-34185252) | |
| 368-555, gnl|Hg17|chr16 (45272266-45272079) | |
| 368-555, gnl|loxAfr1|scaffold_7310 (38415-38273) | |
| 368-555, gnl|mm7|chr8 (83877258-83877117) | |
| 368-555, gnl|Mm7|chr8 (83877234-83877047) | |
| 368-555, gnl|monDom2|scaffold_35 (10669378-10669237) | |
| 368-555, gnl|oryCun1|scaffold_197565 (1355-1499) | |
| 368-555, gnl|panTro1|chrUn_random (9039468-9039326) | |
| 368-555, gnl|rheMac2|chr20 (44494069-44494211) | |
| 368-555, gnl|rn3|chr19 (23142064-23142206) | |
| 368-555, gnl|tetNig1|chrUn_random (32517979-32518113) | |
| 368-555, gnl|xenTro1|scaffold_555 (132660-132517) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| eep (0.122564) |