Ss1.1-rjej31b_f4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTATTTTGGGCTTCGGCCCTCGTCGCGTCCAGTTCTGGTGTCATCTCCCTGCGTCCCGG CGCCGAGGCGGCGGTCCCCAAGGCTGGAGCCACCGCGGGAGCCCCGGT------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------ACGATGTTCTCCAAGCTCTAAGGAAGAAGTCAAGCAAGGATTGAGGGG CCTTGGAGAGGATCTTTTCTTAAATGACAACAATGACAAGAGAAAATTGGGCCCACAATG CTCTGAGACAAGAGGGTCTTGTTAAAGGGAAGGACGATATCTGGAAATGGGGAACCAGCT TCCAAGGGAGCAGCTCCTCTGTTTGGGAGACCTCCCACCTGCATTTTAGACAGTTGCGTT ACCACGAGACATCTGGACCCCAGGAGGCGCTGAGCCGGCTCCGGGAGCTCTGTCGCCGGT GGCTGAGGCCAGAAGCACGCACCAAGGCTCAGATCCTGGAGTTGCTGGTGCTGGAGCAGT TCCTGAGCATCCTGCCTGGAGAGATAAGGACCTGGGTGCAGATCCATCGCCCTGGAAGTG GTGAGGAGGCCGTCGCCCTGGTAGAGGAGCTGCAGAAAGACCTCGAGGGACCAGGACTAA AAGTTCCAGTCCTTGTCCAGAATCCGGACACTCTCCAGGAGGGCATGAGCACTCCAGGAA TAGCCCTTCCTCCTGCAGCCACAGGCAGCCACATATCAGCTGAAATTCACTCAAATCCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTATTTTGGGCTTCGGCCCTCGTCGCGTCCAGTTCTGGTGTCATCTCCCTGCGTCCCGG CGCCGAGGCGGCGGTCCCCAAGGCTGGAGCCACCGCGGGAGCCCCGGT------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------ACGATGTTCTCCAAGCTCTAAGGAAGAAGTCAAGCAAGGATTGAGGGG CCTTGGAGAGGATCTTTTCTTAAATGACAACAATGACAAGAGAAAATTGGGCCCACAATG CTCTGAGACAAGAGGGTCTTGTTAAAGGGAAGGACGATATCTGGAAATGGGGAACCAGCT TCCAAGGGAGCAGCTCCTCTGTTTGGGAGACCTCCCACCTGCATTTTAGACAGTTGCGTT ACCACGAGACATCTGGACCCCAGGAGGCGCTGAGCCGGCTCCGGGAGCTCTGTCGCCGGT GGCTGAGGCCAGAAGCACGCACCAAGGCTCAGATCCTGGAGTTGCTGGTGCTGGAGCAGT TCCTGAGCATCCTGCCTGGAGAGATAAGGACCTGGGTGCAGATCCATCGCCCTGGAAGTG GTGAGGAGGCCGTCGCCCTGGTAGAGGAGCTGCAGAAAGACCTCGAGGGACCAGGACTAA AAGTTCCAGTCCTTGTCCAGAATCCGGACACTCTCCAGGAGGGCATGAGCACTCCAGGAA TAGCCCTTCCTCCTGCAGCCACAGGCAGCCACATATCAGCTGAAATTCACTCAAATCCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-108, gnl|bosTau2|chr22 (12448158-12448056) | |
| 1-108, gnl|Hg17|chr3 (44641533-44641641) | |
| 111-580, gnl|bosTau2|chr22 (12443373-12442904) | |
| 111-580, gnl|Hg17|chr3 (44645572-44646042) | |
| 240-571, gnl|bosTau2|chr19 (14951360-14951028) | |
| 240-571, gnl|Hg17|chr17 (4953749-4953420) | |
| 240-571, gnl|Mm7|chr5 (137070859-137071147) | |
| 290-547, gnl|bosTau2|chr18 (56413583-56413838) | |
| 290-547, gnl|Mm7|chr7 (11490392-11490643) | |
| 303-472, gnl|bosTau2|chr13 (46206184-46206353) | |
| 303-472, gnl|canFam2|chr24 (27793270-27793767) | |
| 303-472, gnl|dasNov1|scaffold_2507 (103656-104125) | |
| 303-472, gnl|echTel1|scaffold_309798 (84835-85263) | |
| 303-472, gnl|hg17|chr20 (34005015-34005511) | |
| 303-472, gnl|Hg17|chr20 (34005308-34005139) | |
| 303-472, gnl|loxAfr1|scaffold_29083 (12644-13151) | |
| 303-472, gnl|mm7|chr2 (156052753-156053103) | |
| 303-472, gnl|Mm7|chr2 (156053005-156052836) | |
| 303-472, gnl|monDom2|scaffold_6 (11109423-11108930) | |
| 303-472, gnl|oryCun1|scaffold_143027 (25188-24754) | |
| 303-472, gnl|panTro1|chr21 (36225996-36226492) | |
| 303-472, gnl|rheMac2|chr10 (28569615-28569119) | |
| 303-472, gnl|rn3|chr3 (146616106-146616456) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-108, gnl|bosTau2|chr22 (12448158-12448056) | |
| 1-108, gnl|Hg17|chr3 (44641533-44641641) | |
| 111-580, gnl|bosTau2|chr22 (12443373-12442904) | |
| 111-580, gnl|Hg17|chr3 (44645572-44646042) | |
| 240-571, gnl|bosTau2|chr19 (14951360-14951028) | |
| 240-571, gnl|Hg17|chr17 (4953749-4953420) | |
| 240-571, gnl|Mm7|chr5 (137070859-137071147) | |
| 290-547, gnl|bosTau2|chr18 (56413583-56413838) | |
| 290-547, gnl|Mm7|chr7 (11490392-11490643) | |
| 303-472, gnl|bosTau2|chr13 (46206184-46206353) | |
| 303-472, gnl|canFam2|chr24 (27793270-27793767) | |
| 303-472, gnl|dasNov1|scaffold_2507 (103656-104125) | |
| 303-472, gnl|echTel1|scaffold_309798 (84835-85263) | |
| 303-472, gnl|hg17|chr20 (34005015-34005511) | |
| 303-472, gnl|Hg17|chr20 (34005308-34005139) | |
| 303-472, gnl|loxAfr1|scaffold_29083 (12644-13151) | |
| 303-472, gnl|mm7|chr2 (156052753-156053103) | |
| 303-472, gnl|Mm7|chr2 (156053005-156052836) | |
| 303-472, gnl|monDom2|scaffold_6 (11109423-11108930) | |
| 303-472, gnl|oryCun1|scaffold_143027 (25188-24754) | |
| 303-472, gnl|panTro1|chr21 (36225996-36226492) | |
| 303-472, gnl|rheMac2|chr10 (28569615-28569119) | |
| 303-472, gnl|rn3|chr3 (146616106-146616456) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.0989218) |