Non-Coding RNA Search

Ss1.1-rlnt23c_n4.5

Sequence:


               
               CGAGTGCGGCAAGGCCTTCCACCAGCGGCCCAGGCTCACGCAGCACCTGCGCGTGCACAC
GGGCGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCCAGCGCTTCAGCCAGCGGCTGAAGCT
CACTCGCCACCAGCGGACGCACACGGGCGAGAAGCCTTACCACTGCGGGGAGTGCGGCCT
GGGCTTCACGCAGGTCTCGCGGCTCACGGAGCACCAGCGCATCCACACGGGCGAGCGGCC
CTTCACCTGCCCCGAGTGCGGCCAGAGCTTCCGGCAGCACGCCAACCTCACGCAGCACCG
GCGCATCCACACGGGCGAGCGGCCCTACTCCTGCCCCGAGTGCGGCAAGGCCTTCCGCCA
GCGGCCCACGCTCACGCAGCACCTGCGCACCCACCGGCGCGAGAAGCCCTTCGCCTGCCA
GGACTGCGGCCGCCGCTTCCACCAGAGCACGAAACTCATCCAGCACCAGCGCGTCCACAG
TGCGGAGTAGCCTGTGCGCGCTGCACCCCGTCCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGTGCGGCAAGGCCTTCCACCAGCGGCCCAGGCTCACGCAGCACCTGCGCGTGCACAC
GGGCGAGAAGCCCTTCGCCTGCCCCGAGTGCGGCCAGCGCTTCAGCCAGCGGCTGAAGCT
CACTCGCCACCAGCGGACGCACACGGGCGAGAAGCCTTACCACTGCGGGGAGTGCGGCCT
GGGCTTCACGCAGGTCTCGCGGCTCACGGAGCACCAGCGCATCCACACGGGCGAGCGGCC
CTTCACCTGCCCCGAGTGCGGCCAGAGCTTCCGGCAGCACGCCAACCTCACGCAGCACCG
GCGCATCCACACGGGCGAGCGGCCCTACTCCTGCCCCGAGTGCGGCAAGGCCTTCCGCCA
GCGGCCCACGCTCACGCAGCACCTGCGCACCCACCGGCGCGAGAAGCCCTTCGCCTGCCA
GGACTGCGGCCGCCGCTTCCACCAGAGCACGAAACTCATCCAGCACCAGCGCGTCCACAG
TGCGGAGTAGCCTGTGCGCGCTGCACCCCGTCCCCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-492, gnl|bosTau2|chr4 (65350065-65350553)
               

               
               1-492, gnl|Hg17|chr7 (148205976-148205488)
               

               
               1-492, gnl|Mm7|chr6 (47779849-47779361)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-492, gnl|bosTau2|chr4 (65350065-65350553)
               

               
               1-492, gnl|Hg17|chr7 (148205976-148205488)
               

               
               1-492, gnl|Mm7|chr6 (47779849-47779361)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lnt (0.142308)
               

               
               cov (0.132153)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               cov (0.132153)

	1-492, gnl\|bosTau2\|chr4 (65350065-65350553)
	1-492, gnl\|Hg17\|chr7 (148205976-148205488)
	1-492, gnl\|Mm7\|chr6 (47779849-47779361)