Non-Coding RNA Search

Ss1.1-rpigcf0_017648.5

Sequence:


               
               CAGGAATTCGAATTCAAACTGGGACAGTCATGGTGCTTATTCATATCCGCAGAAGGATGG
CCACATTTGCTAAAGTATGTTGAATCATCTCAGGTTTCCCTAGAATGAGGGTCTCCTATT
TCAGAAGATCATCTTTCCCTTAGATTCCTGTCCTTGGACCTAAGGATTGTTATCTTGCTG
CACTTGAATGCAGGCCTCATTTTATCTTTCACTTAATGACCTTAGGCATATCTTGTGCTT
TTATTTATGGTTTTATAGTAAAACAAGCCTACTTCATTCCATAGACGTTCTGATGGCTTT
CTTGAGCAATTAACTTCCAGTGGTCTCCCAAAGTTCCCTAGGTTTCCCTCTCTATCTATG
GTCCCCTACTGGGACTTCCACAACTGCCTGTGTAACTATCCTACTCTATCCCTATCATTA
TCTCTGACCATCTTCTAATTCATAGACCCTTCCATTTGTATCGTATCTACTATGCTCTCG
AACTCTGACAAGAGAATCATATTCTCACATTGGAAATTTGAGTGATGTTAGAATCCTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGAATTCGAATTCAAACTGGGACAGTCATGGTGCTTATTCATATCCGCAGAAGGATGG
CCACATTTGCTAAAGTATGTTGAATCATCTCAGGTTTCCCTAGAATGAGGGTCTCCTATT
TCAGAAGATCATCTTTCCCTTAGATTCCTGTCCTTGGACCTAAGGATTGTTATCTTGCTG
CACTTGAATGCAGGCCTCATTTTATCTTTCACTTAATGACCTTAGGCATATCTTGTGCTT
TTATTTATGGTTTTATAGTAAAACAAGCCTACTTCATTCCATAGACGTTCTGATGGCTTT
CTTGAGCAATTAACTTCCAGTGGTCTCCCAAAGTTCCCTAGGTTTCCCTCTCTATCTATG
GTCCCCTACTGGGACTTCCACAACTGCCTGTGTAACTATCCTACTCTATCCCTATCATTA
TCTCTGACCATCTTCTAATTCATAGACCCTTCCATTTGTATCGTATCTACTATGCTCTCG
AACTCTGACAAGAGAATCATATTCTCACATTGGAAATTTGAGTGATGTTAGAATCCTCCA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               14-417, gnl|bosTau2|chr7 (43306332-43305917)
               


               
               201-394, gnl|bosTau2|chr27 (25168376-25168571)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-417, gnl|bosTau2|chr7 (43306332-43305917)
               


               
               201-394, gnl|bosTau2|chr27 (25168376-25168571)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ctl (0.918414)
               

               
               fcc (0.197785)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.918414)
               

               
               fcc (0.197785)

	14-417, gnl\|bosTau2\|chr7 (43306332-43305917)

	201-394, gnl\|bosTau2\|chr27 (25168376-25168571)