Non-Coding RNA Search

Ss1.1-rpliv0125_p15.5

Sequence:


               
               AACCCTATGAGTGTAAGGAATGTGGGAAAGCCTATGCCTGGTATAATAACTTACAATATC
ACATGATAACACACACTAAAGATGGACCTTATAAATGCAAAGAATGTGAGAAAGTATTCA
TTAATCCCAGTTCTCTTAAAATACATGAAAGGAGTCACTCTGAAGAGAATCCGTATCAGT
GTAAAAAATGTGGTAAAAATTTAAGTTCTCAAAAAAGTTTCCGAATGCATGAAAGAACCC
ATACTGGAGAAAAGCCCTATAAATGTAAGATATGTGGGAAAACCTTCACTTCTACTTATG
TTCATGTGCACGAAAGAATTCATACTGGACAGAAACCTTATCGATGTCATGAATGTGGGA
AAGGCTTCATTTGTAGCTCAATCATTCGAAGACACATGAGAATGCACACTAGACAGAAAC
AATATAAAATGTAGAGAATGTGAGAAACCCTATTCTGATCTTATTTGTTTACAAAAGGAT
GACAAGATTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCCTATGAGTGTAAGGAATGTGGGAAAGCCTATGCCTGGTATAATAACTTACAATATC
ACATGATAACACACACTAAAGATGGACCTTATAAATGCAAAGAATGTGAGAAAGTATTCA
TTAATCCCAGTTCTCTTAAAATACATGAAAGGAGTCACTCTGAAGAGAATCCGTATCAGT
GTAAAAAATGTGGTAAAAATTTAAGTTCTCAAAAAAGTTTCCGAATGCATGAAAGAACCC
ATACTGGAGAAAAGCCCTATAAATGTAAGATATGTGGGAAAACCTTCACTTCTACTTATG
TTCATGTGCACGAAAGAATTCATACTGGACAGAAACCTTATCGATGTCATGAATGTGGGA
AAGGCTTCATTTGTAGCTCAATCATTCGAAGACACATGAGAATGCACACTAGACAGAAAC
AATATAAAATGTAGAGAATGTGAGAAACCCTATTCTGATCTTATTTGTTTACAAAAGGAT
GACAAGATTCAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-445, gnl|bosTau2|chr16 (14627411-14626965)
               

               
               1-445, gnl|Mm7|chr11 (50879748-50879302)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-445, gnl|bosTau2|chr16 (14627411-14626965)
               

               
               1-445, gnl|Mm7|chr11 (50879748-50879302)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fco (0.314416)
               

               
               fty (0.17584)
               

               
               liv (0.146284)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               fty (0.17584)
               

               
               liv (0.146284)

	1-445, gnl\|bosTau2\|chr16 (14627411-14626965)
	1-445, gnl\|Mm7\|chr11 (50879748-50879302)