Non-Coding RNA Search

Ss1.1-rptbr0134_l9.5

Sequence:


               
               TTGCACATATTTCCCAGGACCCAAGCCAGATAAAACGCAGCTGTTGAACGATGCTGGAGG
GTACCTGCAAGTCTCAGTTTAGAAACTCTTGTGCTCGGATCCCCCTGGGGCCCTCCCACT
GAGTCCCAGCAACTTCTCCCAGGCTTCAGTCTCCTTTGCTGCCAGATGCATTCAAATGAG
CGCTTAAGATGGAAGATCCGCAACCTTGCCTTGTTTCTGCCTCTCTTGCTGCTCTTTTGG
AATTTACTTTTGTGGACGAGAAGCTCCTGGAAAGGTCATGCCATGGGTTATGGGAGCACT
TCCATGCAGGGTTTCTCTAAGCACCTGCTGTGCCAGGCACTGGGGACCGAGGCACCAGGA
GACAAGCAGGATGGCACCTTCCCTCTACCCTCTGTCCCTGTCAGCCCACCAAGCACATTT
TCATTTCATTTTATATGAAAAGAGGTTTAGAAGCAACTGGTGGTCTGTTCTGGAACAAGG
TAGTATTTAAATATTAGGCACACTAACCAATAGAGCTTGGAGAGCTTCTGAGTTGGTGAA
CACACAGAGGTGCTGTGAAGGTGGTGCTGCTCATTCGTAGCTGGTTTGTCTGAAGTACCA
GAGGCTTGGAACTCAGGATGAATGTCTGAAGTGGGGCAGTCTTGTGGGTCTGAGCCTTTA
ACCTGCGGGGTCTGACTTAATTCCTAGTAGTTAGTGTCAGAATTGAATTGACTTGTGGGA
CACCCAGTTGCTGTCCACAGGGAATTGAAGAATTGCTTAGTTTGGAAAACCACACATTTG
GCGTCAGAAGTGTTATGAATAAAAACAGTTCATGAACAGAAGAGGCTGCTAGCATCACAA
AATAGCAACCAGTCACTGTGGTACTTCCTGGTGGAAGAATAATCAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCACATATTTCCCAGGACCCAAGCCAGATAAAACGCAGCTGTTGAACGATGCTGGAGG
GTACCTGCAAGTCTCAGTTTAGAAACTCTTGTGCTCGGATCCCCCTGGGGCCCTCCCACT
GAGTCCCAGCAACTTCTCCCAGGCTTCAGTCTCCTTTGCTGCCAGATGCATTCAAATGAG
CGCTTAAGATGGAAGATCCGCAACCTTGCCTTGTTTCTGCCTCTCTTGCTGCTCTTTTGG
AATTTACTTTTGTGGACGAGAAGCTCCTGGAAAGGTCATGCCATGGGTTATGGGAGCACT
TCCATGCAGGGTTTCTCTAAGCACCTGCTGTGCCAGGCACTGGGGACCGAGGCACCAGGA
GACAAGCAGGATGGCACCTTCCCTCTACCCTCTGTCCCTGTCAGCCCACCAAGCACATTT
TCATTTCATTTTATATGAAAAGAGGTTTAGAAGCAACTGGTGGTCTGTTCTGGAACAAGG
TAGTATTTAAATATTAGGCACACTAACCAATAGAGCTTGGAGAGCTTCTGAGTTGGTGAA
CACACAGAGGTGCTGTGAAGGTGGTGCTGCTCATTCGTAGCTGGTTTGTCTGAAGTACCA
GAGGCTTGGAACTCAGGATGAATGTCTGAAGTGGGGCAGTCTTGTGGGTCTGAGCCTTTA
ACCTGCGGGGTCTGACTTAATTCCTAGTAGTTAGTGTCAGAATTGAATTGACTTGTGGGA
CACCCAGTTGCTGTCCACAGGGAATTGAAGAATTGCTTAGTTTGGAAAACCACACATTTG
GCGTCAGAAGTGTTATGAATAAAAACAGTTCATGAACAGAAGAGGCTGCTAGCATCACAA
AATAGCAACCAGTCACTGTGGTACTTCCTGGTGGAAGAATAATCAAAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               503-888, gnl|bosTau2|chr10 (53810548-53810931)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               503-888, gnl|bosTau2|chr10 (53810548-53810931)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               tbr (0.462535)
               

               
               ste (0.135208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.462535)
               

               
               ste (0.135208)