Non-Coding RNA Search

Ss1.1-rret14_m21.5

Sequence:


               
               CAATGTTAGAGATTTGCTCCAAAGAAATCTAGTAGGGTGCTATATACAAAACAAGATTGA
CAGTATTTTGATAATTGTTGAAACTGTGTGATGGATTCATGCATTATATTATCTCTCTGT
ATTTGCATAAATTTGATAATTTTCATTATTTTAAAACAACTTACAAAGAACCACTTTGCA
AGTCTCAAGTCTTACTTTCTCAAAGATTACATTTTTTTGGAAAGAATTACATTAGTTCCA
AACATTTCATATAATGTCTGATTGTTTCCTAAAGTGATTTAAATTGTATTGCTGGAGCAA
CTTCCCGAAATGGTGCTTTTATTTGGGATATTAAAAAGGGAAAAATGGTACAACGATTTA
ATGAGGTAAGATGTATTTATTGTCAGCTGAATAACAATTTCTTATATGGTTTCATGTTTT
TTAAATGCTTTTCTGTCTTAATAGTTTATCACCAGGTGGCATTATGTTCTCTTAATTCGA
AGAAAATCAAAAGGACATGCACATGCTAAAATGAATTCTGAAAAATGGAGCTGAATCTGA
GATATAAAAATTCACCTAAATTTGCACTAGAGATTTAAAGGAACTTTGAGTCATCTTCCA
CAAAATTGTATAGGCAAATATTCAATAGTTGGAAAAAGGCTAAACTCAGAACAAGTCCCA
AGCTATGACCCCAGTTTTGTTACTAATTACCTCTTGGCATAGAATTGTTTTCTTACCTTG
AACCTGATTGTTTACCCATAAGATGGTGATGGATTATATAATTTCTTAGGTTTCCTTCCA
GGTCTCAAATTCCATTTTTCTAAACTTAAAAGCTCCCCTATTCTGATTTGTAATGTCGCA
GAGTGTACTTTTCCTTCTGCTTGGAGTTACAGTGTCATCCCATATTTTCCTGTGTTATGT
TGATATTTGGAAAATACATATGACCACATTACAGTATGTTAGCTATGAATGAAGGGACAT
ATGAACAGAATCTAAGATTGTCTCTCACTATCCTGAAATTTCATCCATTTCAATGATTAC
TGTTGAAGTTGATTAAATATGTATCTTATTGGGTAATTGTTTATATATTTGAGGTTGGTA
GGTACAAACTATTACATTTAGAATGGATAAGCAGTGAGGTCCTACTGTTCAACACAGGGA
ACTATATCCAATATCTTGAGATAGAACATGATGAAAGTTAGCATGAGAAAAAGAATGTAT
GTATATGTATGACTAGGTCCCTATGCTGTACAGCAGAAATTGTCACAACACTGTAAATCA
ATTATACTCTAATAAAAATAAAATTAAATTATAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATGTTAGAGATTTGCTCCAAAGAAATCTAGTAGGGTGCTATATACAAAACAAGATTGA
CAGTATTTTGATAATTGTTGAAACTGTGTGATGGATTCATGCATTATATTATCTCTCTGT
ATTTGCATAAATTTGATAATTTTCATTATTTTAAAACAACTTACAAAGAACCACTTTGCA
AGTCTCAAGTCTTACTTTCTCAAAGATTACATTTTTTTGGAAAGAATTACATTAGTTCCA
AACATTTCATATAATGTCTGATTGTTTCCTAAAGTGATTTAAATTGTATTGCTGGAGCAA
CTTCCCGAAATGGTGCTTTTATTTGGGATATTAAAAAGGGAAAAATGGTACAACGATTTA
ATGAGGTAAGATGTATTTATTGTCAGCTGAATAACAATTTCTTATATGGTTTCATGTTTT
TTAAATGCTTTTCTGTCTTAATAGTTTATCACCAGGTGGCATTATGTTCTCTTAATTCGA
AGAAAATCAAAAGGACATGCACATGCTAAAATGAATTCTGAAAAATGGAGCTGAATCTGA
GATATAAAAATTCACCTAAATTTGCACTAGAGATTTAAAGGAACTTTGAGTCATCTTCCA
CAAAATTGTATAGGCAAATATTCAATAGTTGGAAAAAGGCTAAACTCAGAACAAGTCCCA
AGCTATGACCCCAGTTTTGTTACTAATTACCTCTTGGCATAGAATTGTTTTCTTACCTTG
AACCTGATTGTTTACCCATAAGATGGTGATGGATTATATAATTTCTTAGGTTTCCTTCCA
GGTCTCAAATTCCATTTTTCTAAACTTAAAAGCTCCCCTATTCTGATTTGTAATGTCGCA
GAGTGTACTTTTCCTTCTGCTTGGAGTTACAGTGTCATCCCATATTTTCCTGTGTTATGT
TGATATTTGGAAAATACATATGACCACATTACAGTATGTTAGCTATGAATGAAGGGACAT
ATGAACAGAATCTAAGATTGTCTCTCACTATCCTGAAATTTCATCCATTTCAATGATTAC
TGTTGAAGTTGATTAAATATGTATCTTATTGGGTAATTGTTTATATATTTGAGGTTGGTA
GGTACAAACTATTACATTTAGAATGGATAAGCAGTGAGGTCCTACTGTTCAACACAGGGA
ACTATATCCAATATCTTGAGATAGAACATGATGAAAGTTAGCATGAGAAAAAGAATGTAT
GTATATGTATGACTAGGTCCCTATGCTGTACAGCAGAAATTGTCACAACACTGTAAATCA
ATTATACTCTAATAAAAATAAAATTAAATTATAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1067-1296, gnl|bosTau2|chr10 (43586318-43586088)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1067-1296, gnl|bosTau2|chr10 (43586318-43586088)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)