Events

Previous events

Reproducible Workflows with R and sequencing data

2024-02-07. Adrian Geissler. RTH, University of Copenhagen. The seminar will take place at Feb 07 in Fest Auditorium, Aud. A 1-01.01, Bülowsvej 17, 1870 Frederiksberg C

Seminar: Cis-regulatory effect of Human papillomavirus integration in cervical cancers

2023-11-22: by Sabarinathan Radhakrishnan, National Centre for Biological Sciences (NCBS-TIFR), Bengaluru. The seminar will take place 14:30-15:30 at University of Copenhagen, Frederiksberg Campus, Stalden, bygning 1-09, Ridebanevej 6, 1. sal, 1870 Frederiksberg C.

Symposium on Applied Deep Learning in Bioinformatics

On Friday, August 11, 2023 the CRISPRnet project funded by the Novo Nordisk Foundation will host an open Symposium on Applied Deep Learning in Bioinformatics. Venue: University of Copenhagen, Panum, Blegdamsvej 3, Haderup Aud. Registration is needed, but free.

Summer School - Applied deep learning in bioinformatics

This course is an opportunity for you to learn and get hands on experience with data science techniques and how to apply these beyond the topics of CRISPR and network biology. The format will consist of an approximately equal mix of lectures and hands-on. DATE: from Sunday, August 6, 2023, to Thursday, August 10, 2023

Workshop: Probing next generation tools and technologies for CRISPR design

2022-03-04: The CRISPRnet project by newly funded NNF will host a workshop for all interested on CRISPR design

PhD Defence: Adrian Geissler

2021-09-17: Annotation and Transcriptomic Analysis of Bacillus subtilis with Application in Biotechnology. Digital defence with partly physical presence.

PhD Defence: Giulia Corsi

2021-09-03: 'Transcriptome profiling of neurodegenerative disorders modelled with IPSCs and computational methods for CRISPR/Cas9 editing'. The defence will take place on September 3rd, 2021 from 13:00-17:00 in the Swan Library, Building 1-04, Grønnegårdsvej 7, 1870 Frederiksberg C.

CRISPRtsunami online course

2021 Sep 10: The CRISPR Tsunami is a 1-day introductory online course to computational Cas9-gRNA design organized by Jan Gorodkin and Giulia Corsi at the Center for non-coding RNA in Technology and Health.

Signup closed.

Venue: Online on 10 September 2021 (9.00-16.30), Free of Charge.

Sign-up and Flyer

PhD Defence: Oana Palasca

2021-02-26: Animal models for human health and disease - integration and comparison of transcriptomic data. The defence will take place on February 26th, 2021 from 13:00-17:00 via Zoom, please follow the link: https://ucph-ku.zoom.us/s/68228659344

Seminar: Rapid Genome Scale Engineering

2019-08-21: Richard Fox - Executive Director of Data Science, INSCRIPTA. The seminar will take place on Wednesday, August 21, 2019, 09:30 – 10:30 at the University of Copenhagen, Room 7.15.92, Mærsk Tower, 15th floor, Blegdamsvej 3b, 2200 Copenhagen.

PhD defence: Ferhat Alkan

2019-02-01: Computationally efficient large-scale prediction of RNA interactions: methods and applications. The defence will take place on February 1st, 2019 from 14:00-17:00 at Aud - A1-05.01 (2-02), Dyrlægevej 100, 1870 Frederiksberg.

Seminar: RNase E endonuclease as a novel maturation enzyme of a CRISPR_Cas system and in the sRNA-mediated regulation of gene expression

2018-04-25: Wolfgang Hess, University of Freiburg, DE. The seminar will take place April 25, 15.15 - 16.00 at University of Copenhagen, SUND/SCIENCE, Building 1-04, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

PhD Defence: Rebecca Kirsch

2018-04-26: The defence will take place on April 26, 2018, 14:00-17:00, Fest Auditorium, Aud. A 1-01.01, Bülowsvej 17, 1870 Frederiksberg C

Everybody is welcome.

Seminar: 5pUTR Structure and its Role in Transcription and Translation

2017-11-17: Ivo Hofacker, TBI, University of Vienna. The seminar will take place November 17, 13.30-14.15 at University of Copenhagen, SUND/SCIENCE, Building 1-04, Grønnegårdsvej 7, 1st floor library, Frederiksberg C

PhD defence: Xiaoyong Pan

2017-11-10: Computational analysis of long non-coding RNAs and their functions. The defence will take place on November 10, 2017, 14:00-17:00, Orangeriet, Dyrlægevej 36, 1870 Frederiksberg C

Seminar: Efficient approximations of RNA kinetics landscapes using non-redundant sampling

2017-11-08: by Yann Ponty. LIX - Batiment Turing, Ecole Polytechnique, France. The seminar will take place Nov 08, 15.30-16.30 at University of Copenhagen, SUND/SCIENCE, Building 1-04, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

Seminar: The multiple facets of post-transcriptional regulation by non-coding RNAs

2017-06-22: by Hanah Margalit, The Hebrew University of Jerusalem. The seminar will take place June 22, 14.00-15.00 at University of Copenhagen, SUND/SCIENCE, Building 1-04, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

PhD Defence: Alexander Junge

2017-06-23: Towards a systems-level understanding of RNA secondary structure and interactions. The defence will take place on June 23rd, 2017, 14.15-17.15 in Auditorium A2-70.03, Thorvaldsensvej 40, 1870 Frederiksberg C.

Seminar: Oxford Nanopore Sequencing Down Under: A Current Affair

2017-05-24: by Martin A Smith, Garvan Inst. of Medical Research. The seminar will take place May 24th, 15.00-16.00 at University of Copenhagen, SUND/SCIENCE, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

Workshop: From Animal Genomics to Functional Analysis

2016-11-23: University of Copenhagen, Frederiksberg Campus, Grønnegårdsvej 7, building 1-04, 2nd floor library from 13:00-16:05. Speakers: Ted Kalbfleisch, Mogens Sandø Lund, Alan Archibald and Merete Fredholm

Seminar: Oncogenic microRNAs biogenesis as a drug target: new applications for synthetic RNA ligands

2016-09-27: by Maria Duca, UMR7272 CNRS – Université Nice Sophia Antipolis. The seminar will take place Sep 27th, 10.00-10.45 at University of Copenhagen, SUND/SCIENCE, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

PhD Defence: Nikolai Hecker

2016-09-19: RNA secondary structure flexibility and gene regulation inside the human brain. The defence will take place on Sep 19th, 13:15-16.15 in Festauditoriet (Aud. A1-01.01), Bülowsvej 17, 1870 Frederiksberg C

Mini Workshop: RNA Transcriptomics

2016-09-19: University of Copenhagen, 10.00-11.45, at Festauditoriet, A1-01.01, Frederiksberg Campus, Bülowsvej 17, 1870 Frederiksberg C, Denmark. Speakers: Kay Niesselt, University of Tübingen and Daniel Gautheret, Université Paris Sud.

Seminar: High-performance grammar-based stream processing

2016-07-07: by Fritz Henglein (DIKU). The seminar will take place July 7th, 13.15-14.00 at University of Copenhagen, SUND/SCIENCE, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

Seminar: Genomic selection â€“ status and an outlook to the future

2016-06-27: by Mogens Sandø Lund, Aarhus University. The seminar will take place June 27th, 13.30-14.15 at University of Copenhagen, Grønnegårdsvej 3 ( building 1-61), 2nd floor library, Frederiksberg C.

PhD Defense: Caroline Junker Mentzel

2016-06-28: Porcine Models of Human Obesity - microRNA and Gene Expression. The defence will take place on June 28th, 13:00-16.00 in Fest auditoriet (Aud. A1-01.01), Bülowsvej 17, 1870 Frederiksberg C.
Everybody is welcome. Registration is not necessary.

Mini Workshop: Bioinformatics

2016-04-28: Mini workshop: Bioinformatics. University of Copenhagen. From 13.15- 15.00, in Auditorium A1-05.01, Dyrlægevej 100, Frederiksberg Campus. Speakers: Larry Ruzzo and Rolf Backofen

PhD Defense: Anne Wenzel

2016-04-29: RNA interactions of coding and non-coding RNAs. The defence will take place on April 29th at 13:30 in Auditorium A2-70.03, Thorvaldsensvej 40, 1870 Frederiksberg C.
Everybody is welcome. Registration is not necessary.

PhD Defense: Christian Garde

2016-02-04: Mechanisms and functions of protein-RNA interactions. The defense will take place Thursday 4 February 2016 at 13:00, Center for Biological Sequence Analysis, DTU, Building 208, auditorium 062

Everybody is welcome. Registration is not necessary.

PhD Defence: Corinna Theis

2015-12-07: The potential of RNA 3D Modules in the prediction of structured RNAs. The defence will take place on Decemebr 7th at 13:00 in Orangeriet, Dyrlægevej 36, 1870 Frederiksberg C.

National workshop on non-coding RNA

2015-10-07: Danish national workshop on non-coding RNA. Keynote Speakers: Ronald Breaker, Yale University. Speakers also include: Morten Sommer, Torben Heick Jensen and Anders Lund. Location: University of Copenhagen, The Ceremonial Hall, Frue Plads 4, 1168 Copenhagen.

Seminar: Identifying and Cataloguing Functional LncRNAs in Human and Mouse

2015-09-10: by Jennifer Harrow, Wellcome Trust Sanger Institute, UK. The seminar will take place September 10th, 14.15-15.00 at University of Copenhagen, SUND/SCIENCE, Orangeriet, Dyrlægevej 36, Frederiksberg C.

Seminar: Virus Genomics

2015-09-01: by Manja Marz, University of Jena. The seminar will take place September 1st, 13.15-14.00 at University of Copenhagen, SUND/SCIENCE, Grønnegårdsvej 7, 1st floor library, Frederiksberg C.

Seminar: Two Stories about Computers and Biology

2015-08-18: by Larry Ruzzo, University of Washington. The seminar will take place August 18th, 14.00-14.45 at University of Copenhagen, Orangeriet, Dyrlægevej 36, Frederiksberg C

Workshop: Mammalian Genes, Genomes, Transcriptomes and Networks

23-06-2015: University of Copenhagen, 13:25-16:30, Orangeriet, Dyrlægevej 36 at Frederiksberg Campus. Speakers: Martien Groenen, Uwe Ohler, Thomas Litman and Lars Juhl Jensen.

Seminar: Molecular profiling of Colon Cancer

2015-04-16: by Francis Barany, Professor of Microbiology and Immunology, Weill Cornell Medical College, US. The seminar will take place April 16th, 14.00-15.00 at University of Copenhagen, Orangeriet, Dyrlægevej 36, Frederiksberg C

PhD Defence: Aashiq Hussain Mirza

2015-04-17: Structured non-coding RNAs in Autoimmune and Inflammatory Diseases. The defence will take place on April 17th at 14:00 in Medical Museion auditorium, Bredgade 62, 1260 Copenhagen

Seminar: Development of single stranded RNaseH recruiting antisense oligonucleotides for analysis of lncRNA function in cell culture and animals

2014-10-03: by Niels Frandsen, Exiqon. The seminar will take place October 3rd, 12.30-1.15 at University of Copenhagen, SUND/SCIENCE, Dyrlægevej 16, Orangeriet, Frederiksberg C.

Mini Workshop: From mutations in RNA structure to 3D motifs detection

2014-06-30: Mini workshop. University of Copenhagen. From 13.00 to 14.30, Grønnegårdsvej 3; 2nd floor library. Speakers: Jermone Waldispuhl and Craig Zirbel

cphRNA 2014 - Symposium "non-coding RNAs: from Discovery to Function"

2014-06-27: cphRNA 2014 - Symposium "non-coding RNAs: from Discovery to Function" (free), 09.15-17.05, at festauditoriet, A1-01.01, Frederiksberg Campus, Bulowsvej 17, 1870 Frederiksberg C, Denmark. Organised by RTH and COAT.

Seminar: tRNA Nucleotidyltransferases: Reactions, Substrates, Evolution

2014-02-25: by Mario Moerl, Institute of Biochemistry, University of Leipzig. The Seminar will take place on February 25th, 14.15-15.00pm at University of Copenhagen, SUND/LIFE, Dyrelægevej 36, Orangeriet, Frederiksberg C.

cphRNA 2014: Summer School in RNA Bioinformatics

RTH and COAT are co-organizing a Summer School in RNA Bioinformatics.

The event will take place on June 23rd to June 28th in the Copenhagen area. Details to follow. Program and application procedure.

Seminar: Fragment-Based Design of RNA Sequences and Detection of RNA Switches

2014-01-30: by Danny Barash, Department of Computer Science, Ben-Gurion University. The Seminar will take place on January 30th, 11.15am-12.00pm at University of Copenhagen, SUND/LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106, 1870 Frederiksberg C.

PhD defence: Sabarinathan Radhakrishnan

2014-01-31: Impact of mutations in structured RNAs. The defence will take place on January 31st at 13:15 in auditorium A2-70.03, Thorvaldsensvej 40, ground floor, University of Copenhagen, LIFE, Frederiksberg.

PhD Defence: Sachin Pundir

2013-10-08: In Silico detection of RNA-seq profiles in high-throughput sequencing data and their relation to non-coding RNAs. Venue: Orangeriet, Dyrlægevej 36, Frederiksberg C. Time: 13.00h.
Everybody is welcome. Registration is not necessary.

Seminar: Making and Breaking of RNA in Human Nuclei

2013-09-16: Torben Heick, Centre for mRNP Biogenesis and Metabolism; Department of Molecular Biology and Genetics, Aarhus University.

The Seminar will take place 11.15-12.00 at University of Copenhagen, in room A2-84.01, Building 2-84, Thorvaldsensvej 40, ground floor, 1870 Frederiksberg C

Seminar: An approach to bias correction in RNAseq

2013-09-05: Larry Ruzzo, University of Washington. The Seminar will take place 11.00-11.30 at University of Copenhagen, 2nd Floor Library, Building 1-61, Grønnegårdsvej 3, 1870 Frederiksberg C

Seminar: Tales from the Cellular Underworld: mRNA Decay and Disease

2013-07-04: by Lynne Maquat Lynne E. Maquat, Center for RNA Biology, University of Rochester, USA. The Seminar will take place on July 4th, 11.15am -12.00pm at University of Copenhagen, SUND/LIFE, A1-01.15 / Building 1-01, Bülowsvej 17, 1. sal, 1870 Frederiksberg C.

Seminar: The translatome

2013-04-25: by Alessandro Quattrone, CIBIO - University of Trento, Italy. The seminar will take place 14:15-15:00, at University of Copenhagen, SUND/LIFE, A1-01.13 / Building 1-01, Bülowsvej 17, 1. sal, 1870 Frederiksberg C.

Seminar: A rising number of microRNAs in the human genome detected by computational and biogenesis studies

2013-04-03: by Marc Friedlander, Centre for Genomic Regulation, Spain. The seminar will take place at April 3rd, 11:15-12:00, at University of Copenhagen, SUND/LIFE, A1-01.13 / Building 1-01, Bülowsvej 17, 1. sal, 1870 Frederiksberg C.

Seminar: Modelling error in next-generation sequencing data - applications in metagenomics

2012-11-28: by Inge Jonassen, University of Bergen, Norway. The seminar will take place on November 28th, from 14.00-15.00 at University of Copenhagen, SUND/LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106, 1870 Frederiksberg C

Seminar: RNA interactions with other RNAs and Proteins.

2012-11-08: by Rolf Backofen, Albert Ludwigs University, Freiburg, Germany. The seminar will take place on November 8th, from 11.00-12.00 at University of Copenhagen, SUND/LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106, 1870 Frederiksberg C

Workshop: From proteins to noncoding RNAs and their intimacy

2012-10-24: University of Copenhagen, at 11:00, Auditorium A2-82.01, Thorvaldsensvej 40, Frederiksberg Campus. Speakers, Des Higgins, Christian W. Zwieb, Yiota Poirazi, and Cedric Notredame

Seminar: Emerging roles of microRNAs in beta cell functions and in the development of diabetes

2012-09-05: by Romano Regazzi, Department of Biology, Lausanne University, Switzerland on September 5th from 14.00-15.00 at University of Copenhagen, SUND/LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106, 1870 Frederiksberg C

Symposium: The transcriptome - from functional RNAs to RNA drugs

2012-08-24: Symposium on August 24th at 9:30-15:45. Location: Lundbeck Auditorium, Copenhagen Biocentre, Ole Maaløes Vej 5, Copenhagen. Read the symposiom program .

PhD Summer Course - apply now

RTH is co-organizing a PhD course on RNA sequencing and computational analysis together with Centre for Computational and Applied Transcriptomics (COAT). The course is held at Dept. of Biology, University of Copenhagen on August 20-24, 2012. The read the program .

Seminar: From structural bioinformatics to engineering of new enzymes

2012-06-06: by Janusz Bujnicki, Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, Warsaw, Poland on June 6th at 14.00-15.00 in auditorium A1-01.14, Nordre sti 2, 1st floor, University of Copenhagen, LIFE, Frederiksberg.

Seminar: Circular non-coding RNAs â€“ new type of players in gene regulation.

2012-05-23: by Jørgen Kjems, Department of Molecular Biology, Aarhus University on May 23rd at 11.15-12.15 in auditorium A1-01.14, Nordre sti 2, 1st floor, University of Copenhagen, LIFE, Frederiksberg.

Seminar: miR-9 regulates splicing and cytokine signaling in Hodgkin's Lymphoma

2012-05-09: by Anders H. Lund, Biotech Research and Innovation Centre (BRIC), University of Copenhagen on May 9th at 14.00-15.00 in auditorium A2-70.02, Thorvaldsensvej 40, ground floor, University of Copenhagen, LIFE, Frederiksberg.

Seminar: The elementary Modules of RNA and how to detect them

2012-03-28: by Eric Westhof, Architecture et Réactivité de l’ARN, Université de Strasbourg, Institut de Biologie Moléculaire et Cellulaire, CNRS. At 14:00 in auditorium A2-70.04, Thorvaldsensvej 40, University of Copenhagen, LIFE, Frederiksberg.

Seminar: Searching for distant homologs of small, non-coding RNAs

2012-03-14: by Robert Giegerich, Center of Biotechnology and Faculty of Technology, Bielefeld University. At 14:00 in auditorium A2-84.-11, building 2-84, Thorvaldsensvej 40, University of Copenhagen, LIFE, Frederiksberg.

Workshop: From the coding to the noncoding genome and its implications

2012-01-19: University of Copenhagen, at 12:30, lecture room A2-83.01, Thorvaldsensvej 40 at Frederiksberg campus. Speakers: Bernhard Boehm, Gary Stormo, Peter Stadler, John Mattick and Niels Tommerup.

Seminar: Accessibility is a significant feature for design of siRNAs targeting structured RNA

2011-12-20: by Hakim Tafer, University of Leipzig, Institute for Bioinformatics. At 14:00, University of Copenhagen, LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106, 1870 Frederiksberg C.

Seminar: Topology and folding of RNA interaction structures

2011-11-17: by Christian Reidys, University of Southern Denmark. At 14:00, University of Copenhagen, LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106, 1870 Frederiksberg C.

Seminar: The evolutionary significance of ancient genome duplications

2011-11-04: By Professor Yves Van de Peer, VIB Department of Plant Systems Biology, University of Gent. At 11:00, University of Copenhagen, LIFE, Auditorium A2-84.11 (3-21), Thorvaldsensvej 40, Frederiksberg

Workshop: High throughput approaches to RNA [secondary] structure

2011-05-26: Max Planck Institute for Mathematics in the Sciences. Inselstraße 22. 04103 Leipzig. Germany.

Seminar: Finding the needles in the haystack: The complexity of known and putative novel microRNAs revealed by SOLiD deep sequencing and biology-oriented bioinformatic analysis

2011-05-25: By Alessandro Guffanti, Bioinformatics, Genomnia srl - Lainate, Milano, Italy. At 14:30, University of Copenhagen, LIFE, Grønnegårdsvej 7 (bldg. 1-04), 1st floor, Library/M106